Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 REXO1L2P-201ENST00000425429 2069 ntBASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ARMC10P1-201ENST00000313754 855 ntBASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 AC063952.2-201ENST00000498792 1227 ntBASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 KRT18P35-201ENST00000510488 1269 ntBASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AC016027.1-202ENST00000607927 1699 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 KRT18P38-201ENST00000449496 1282 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 SEC1P-202ENST00000473944 940 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AL445228.2-201ENST00000605589 952 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 AC020658.6-201ENST00000623564 1870 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 KRT8P47-201ENST00000604727 1398 ntBASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.82□□□□□ -0.2
UBQLN2Q9UHD9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 HOXB1-202ENST00000577092 1414 ntBASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN2Q9UHD9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms