Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 AC104457.1-201ENST00000401024 814 ntBASIC14.93□□□□□ -0.02
DKK4Q9UBT3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MTX1P1-201ENST00000440904 838 ntBASIC14.93□□□□□ -0.02
DKK4Q9UBT3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 HIST2H2BC-201ENST00000498492 580 ntBASIC14.93□□□□□ -0.02
DKK4Q9UBT3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 AC104982.3-201ENST00000581995 514 ntBASIC14.93□□□□□ -0.02
DKK4Q9UBT3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 U62317.3-201ENST00000608319 855 ntBASIC14.93□□□□□ -0.02
DKK4Q9UBT3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DKK4Q9UBT3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC074338.1-201ENST00000416825 156 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 VDAC1P7-201ENST00000462417 847 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 EEF1DP1-201ENST00000585891 896 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 AC091812.3-201ENST00000621362 345 ntBASIC14.92□□□□□ -0.02
DKK4Q9UBT3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DKK4Q9UBT3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DKK4Q9UBT3 PP12613-201ENST00000424958 2230 ntBASIC14.91□□□□□ -0.02
DKK4Q9UBT3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms