Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MIR661-201ENST00000384842 89 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 AL079307.3-201ENST00000556114 283 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 AC061975.2-201ENST00000581722 295 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 AL133215.2-201ENST00000609242 977 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRFN1Q9P244 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 AC084018.2-201ENST00000613093 2607 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 U82695.1-201ENST00000635752 1889 ntBASIC14.93□□□□□ -0.02
LRFN1Q9P244 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRFN1Q9P244 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC087499.5-201ENST00000452760 1342 ntBASIC14.92□□□□□ -0.02
LRFN1Q9P244 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MRPS18AP1-201ENST00000414458 589 ntBASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC009118.2-201ENST00000613275 655 ntBASIC14.92□□□□□ -0.02
LRFN1Q9P244 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.92□□□□□ -0.02
LRFN1Q9P244 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 AC063926.3-201ENST00000624734 5658 ntBASIC14.92□□□□□ -0.02
LRFN1Q9P244 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRFN1Q9P244 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.91□□□□□ -0.02
LRFN1Q9P244 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.91□□□□□ -0.02
LRFN1Q9P244 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.91□□□□□ -0.02
LRFN1Q9P244 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.91□□□□□ -0.02
LRFN1Q9P244 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.91□□□□□ -0.02
LRFN1Q9P244 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRFN1Q9P244 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms