Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 SEC63P1-201ENST00000425785 1258 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RBPMS2P1-201ENST00000437762 623 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 METTL21AP1-201ENST00000438852 635 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 HLA-J-203ENST00000494367 1087 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 SPTSSB-204ENST00000617024 1292 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AC005052.1-201ENST00000625181 2492 ntBASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 MIR4321-201ENST00000592276 80 ntBASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 LINC00628-201ENST00000628516 1289 ntBASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRDM9Q9NQV7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PRDM9Q9NQV7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms