Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 PKD1P5-201ENST00000532415 10291 ntBASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 KRT18P34-201ENST00000488218 1270 ntBASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBB1Q9H4B7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AC004870.1-201ENST00000315132 882 ntBASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AC245100.5-201ENST00000452108 331 ntBASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 AC011477.6-201ENST00000604980 1927 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms