Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RNU1-129P-201ENST00000384064 167 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 FAM197Y8-203ENST00000450145 560 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 OR7E47P-204ENST00000575924 449 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 U1.21-201ENST00000580816 167 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 ACTL9-202ENST00000612068 1252 ntBASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 AL513477.1-201ENST00000602865 2407 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 CXCL1P1-201ENST00000502804 216 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AL031432.2-201ENST00000566714 459 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AL928711.1-201ENST00000570165 459 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AL031055.1-201ENST00000606362 631 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AC126755.1-201ENST00000525846 6405 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AC005622.1-201ENST00000636801 1703 ntBASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
POLR2J3Q9H1A7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
POLR2J3Q9H1A7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
POLR2J3Q9H1A7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AC004790.2-201ENST00000623588 572 ntBASIC15.08■□□□□ 0
POLR2J3Q9H1A7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AC022532.1-201ENST00000624563 1728 ntBASIC15.08■□□□□ 0
POLR2J3Q9H1A7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.08■□□□□ 0
POLR2J3Q9H1A7 AC073347.1-201ENST00000421633 2643 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms