Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 AC241585.1-201ENST00000433527 519 ntBASIC17.62■□□□□ 0.41
ACAP3Q96P50 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 AL512638.1-201ENST00000457493 794 ntBASIC17.62■□□□□ 0.41
ACAP3Q96P50 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACAP3Q96P50 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ACAP3Q96P50 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 AL590560.3-201ENST00000623350 461 ntBASIC17.61■□□□□ 0.41
ACAP3Q96P50 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.61■□□□□ 0.41
ACAP3Q96P50 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACAP3Q96P50 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 FAM8A3P-201ENST00000427218 844 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 AL139010.1-201ENST00000454878 894 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 AC092364.2-202ENST00000597012 1073 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 AJ011932.1-201ENST00000621707 465 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 AC100757.3-201ENST00000622361 1406 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms