Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC073592.2-201ENST00000623062 780 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AL135901.1-201ENST00000451812 333 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 GOLGA2P7-209ENST00000560408 745 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC107464.3-201ENST00000609172 737 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 BX323043.1-201ENST00000641006 1765 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PGGT1BP2-201ENST00000398621 1028 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC026410.3-201ENST00000514280 936 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MIR4522-201ENST00000584932 87 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC009517.1-201ENST00000454750 570 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 LY6E-215ENST00000523847 427 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 RN7SL470P-201ENST00000583069 259 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 MIR6819-201ENST00000622122 61 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AL137060.1-201ENST00000618151 2648 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 SURF4-203ENST00000371991 715 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 KRT8P6-201ENST00000399259 1207 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 KRT18P44-201ENST00000416086 1285 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC092284.1-201ENST00000511386 1289 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC226150.1-201ENST00000544259 466 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 AC093462.1-201ENST00000621167 1683 ntBASIC6.38□□□□□ -1.39
SYNE2Q8WXH0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC092638.2-201ENST00000441105 947 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms