Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 LINC02447-202ENST00000501888 2146 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 MIR600HG-201ENST00000449175 5984 ntBASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTN4IP1Q8WWV3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 KRT8P39-201ENST00000396270 1433 ntBASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 CDC14C-201ENST00000428251 1719 ntBASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 AC087163.2-201ENST00000457299 853 ntBASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 GGTLC5P-201ENST00000617623 998 ntBASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PGM5P2-202ENST00000637225 1043 ntBASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTN4IP1Q8WWV3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 PCGF3-213ENST00000620529 1899 ntBASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 LINC01144-201ENST00000626198 1710 ntBASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms