Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 AL365203.3-201ENST00000609742 2057 ntBASIC16.28■□□□□ 0.2
CHD5Q8TDI0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 FO393414.2-201ENST00000405153 598 ntBASIC16.27■□□□□ 0.2
CHD5Q8TDI0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 RN7SL618P-201ENST00000477850 296 ntBASIC16.27■□□□□ 0.2
CHD5Q8TDI0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 AC044860.1-202ENST00000559481 777 ntBASIC16.27■□□□□ 0.2
CHD5Q8TDI0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 AC010491.1-201ENST00000563101 2797 ntBASIC16.27■□□□□ 0.2
CHD5Q8TDI0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD5Q8TDI0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 SPDYE18-201ENST00000510091 1050 ntBASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AC097359.3-201ENST00000603982 1210 ntBASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AC008761.3-201ENST00000624803 892 ntBASIC16.27■□□□□ 0.19
CHD5Q8TDI0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.27■□□□□ 0.19
CHD5Q8TDI0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD5Q8TDI0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 PCDHA1-201ENST00000378133 2726 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC114501.2-201ENST00000439631 535 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC104794.3-201ENST00000566840 1248 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms