Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AC008132.1-202ENST00000342005 1389 ntBASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AL645728.1-201ENST00000366221 2101 ntBASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 PCGF3-213ENST00000620529 1899 ntBASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 MIR1202-201ENST00000408529 83 ntBASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 CU633904.3-201ENST00000624042 1029 ntBASIC10.71□□□□□ -0.69
ALMS1Q8TCU4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 AC005730.2-201ENST00000564549 1184 ntBASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 PPY2P-201ENST00000582808 702 ntBASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 AL592424.1-201ENST00000563624 1536 ntBASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.71□□□□□ -0.7
ALMS1Q8TCU4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC114501.1-201ENST00000445949 172 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AP001582.1-201ENST00000525856 295 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms