Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST2Q8NFU1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.45■□□□□ 0.38
BEST2Q8NFU1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST2Q8NFU1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST2Q8NFU1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 RPL37AP1-201ENST00000412502 279 ntBASIC17.44■□□□□ 0.38
BEST2Q8NFU1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 TEX28P1-201ENST00000613479 1221 ntBASIC17.44■□□□□ 0.38
BEST2Q8NFU1 TEX28P2-201ENST00000617764 1221 ntBASIC17.44■□□□□ 0.38
BEST2Q8NFU1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 AL590560.3-201ENST00000623350 461 ntBASIC17.44■□□□□ 0.38
BEST2Q8NFU1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST2Q8NFU1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.43■□□□□ 0.38
BEST2Q8NFU1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.43■□□□□ 0.38
BEST2Q8NFU1 UGT1A2P-201ENST00000454886 866 ntBASIC17.43■□□□□ 0.38
BEST2Q8NFU1 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.43■□□□□ 0.38
BEST2Q8NFU1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST2Q8NFU1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 MIR661-201ENST00000384842 89 ntBASIC17.42■□□□□ 0.38
BEST2Q8NFU1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST2Q8NFU1 AL080243.2-201ENST00000418783 582 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms