Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ELK1P1-201ENST00000485699 580 ntBASIC19.87■□□□□ 0.77
RTL9Q8NET4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL9Q8NET4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 AC098850.1-201ENST00000419919 790 ntBASIC19.86■□□□□ 0.77
RTL9Q8NET4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 RARRES2P5-201ENST00000564013 466 ntBASIC19.86■□□□□ 0.77
RTL9Q8NET4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL9Q8NET4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RTL9Q8NET4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC074338.1-201ENST00000416825 156 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 RN7SL837P-201ENST00000463010 287 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC123567.1-201ENST00000548294 1261 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AC080080.1-201ENST00000625121 2420 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 BNIP3P1-202ENST00000550043 1585 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 AP001282.1-201ENST00000531301 1499 ntBASIC19.85■□□□□ 0.77
RTL9Q8NET4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL9Q8NET4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTL9Q8NET4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms