Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 AL592424.1-201ENST00000563624 1536 ntBASIC14.27□□□□□ -0.12
CPEB3Q8NE35 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 SPCS2P4-201ENST00000436160 681 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 LINC01225-203ENST00000563550 1244 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC027307.2-201ENST00000591252 911 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AC105339.1-204ENST00000636249 355 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 AL596087.1-201ENST00000400979 1969 ntBASIC14.27□□□□□ -0.13
CPEB3Q8NE35 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPEB3Q8NE35 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC073389.1-201ENST00000595595 795 ntBASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.26□□□□□ -0.13
CPEB3Q8NE35 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPEB3Q8NE35 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
CPEB3Q8NE35 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms