Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AC098818.2-201ENST00000564925 2320 ntBASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 FAM86LP-201ENST00000478302 853 ntBASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 BRI3BPP1-201ENST00000594224 787 ntBASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AC005252.2-201ENST00000624630 1141 ntBASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AL136982.4-201ENST00000437689 1740 ntBASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 BAATP1-201ENST00000412284 1225 ntBASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 AL096828.3-201ENST00000615354 462 ntBASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCDC168Q8NDH2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC009113.1-201ENST00000570267 2443 ntBASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms