Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC069120.2-201ENST00000524091 540 ntBASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 MTND6P24-201ENST00000440466 518 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 CYMP-203ENST00000474680 1263 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AC243562.2-201ENST00000561247 970 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AC027796.2-201ENST00000575326 344 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AL133215.2-201ENST00000609242 977 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AC093512.1-201ENST00000617969 520 ntBASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAM1L1Q8N609 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 AL691432.1-201ENST00000596308 1422 ntBASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 DUX4L27-201ENST00000554796 1261 ntBASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 AL158211.3-201ENST00000607385 239 ntBASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAM1L1Q8N609 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 AP001282.1-201ENST00000531301 1499 ntBASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms