Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 AL161645.1-201ENST00000622716 1255 ntBASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf42Q8N5U0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 GGT3P-204ENST00000453783 1664 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 KRT18P13-201ENST00000400056 1290 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 AL355306.1-201ENST00000415580 579 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 AL671277.1-201ENST00000429656 993 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 MIR3687-2-201ENST00000577708 61 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 MIR4469-201ENST00000583919 79 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 MIR3687-1-201ENST00000614492 61 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 WASH6P-202ENST00000359512 1437 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 LINC02199-201ENST00000506655 2702 ntBASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf42Q8N5U0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms