Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 NORAD-201ENST00000565493 5339 ntBASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 AC092850.2-201ENST00000623821 2697 ntBASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 MIR574-201ENST00000385209 96 ntBASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TTC9CQ8N5M4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TTC9CQ8N5M4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TTC9CQ8N5M4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TTC9CQ8N5M4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
TTC9CQ8N5M4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TTC9CQ8N5M4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 AC073439.1-201ENST00000624121 1774 ntBASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 MIR648-201ENST00000385046 94 ntBASIC12.89□□□□□ -0.35
TTC9CQ8N5M4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms