Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 RBM17P3-201ENST00000417687 1192 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 HCG4-201ENST00000418983 998 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC107918.2-201ENST00000530817 355 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC005412.3-201ENST00000580309 715 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC138894.3-201ENST00000603787 634 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 MIR600HG-201ENST00000449175 5984 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AC136621.1-201ENST00000624017 2304 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 AL161772.1-201ENST00000610494 4412 ntBASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 MTDHP3-201ENST00000594186 672 ntBASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 NPAP1P7-201ENST00000613027 823 ntBASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUDCD3Q8IVD9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 LINC02228-204ENST00000642115 2962 ntBASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms