Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
KRT39Q6A163 AC061975.2-201ENST00000581722 295 ntBASIC17.57■□□□□ 0.4
KRT39Q6A163 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT39Q6A163 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT39Q6A163 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT39Q6A163 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT39Q6A163 CDC14C-201ENST00000428251 1719 ntBASIC17.57■□□□□ 0.4
KRT39Q6A163 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT39Q6A163 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT39Q6A163 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
KRT39Q6A163 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT39Q6A163 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
KRT39Q6A163 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT39Q6A163 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 LINC02199-201ENST00000506655 2702 ntBASIC17.56■□□□□ 0.4
KRT39Q6A163 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 AL365203.3-201ENST00000609742 2057 ntBASIC17.56■□□□□ 0.4
KRT39Q6A163 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 HAUS4P1-201ENST00000406739 1145 ntBASIC17.56■□□□□ 0.4
KRT39Q6A163 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
KRT39Q6A163 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.56■□□□□ 0.4
KRT39Q6A163 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
KRT39Q6A163 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT39Q6A163 LINC02447-202ENST00000501888 2146 ntBASIC17.56■□□□□ 0.4
KRT39Q6A163 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT39Q6A163 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC069224.1-201ENST00000566372 1715 ntBASIC17.55■□□□□ 0.4
KRT39Q6A163 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC008677.1-201ENST00000519230 1561 ntBASIC17.55■□□□□ 0.4
KRT39Q6A163 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.55■□□□□ 0.4
KRT39Q6A163 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC005237.2-201ENST00000434368 219 ntBASIC17.55■□□□□ 0.4
KRT39Q6A163 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 AC055717.3-201ENST00000622967 595 ntBASIC17.55■□□□□ 0.4
KRT39Q6A163 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT39Q6A163 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT39Q6A163 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT39Q6A163 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms