Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.21■□□□□ 0.5
HERC4Q5GLZ8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC026691.1-201ENST00000602502 2017 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC073439.1-201ENST00000624121 1774 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 HLA-V-201ENST00000429037 534 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC093724.1-201ENST00000448659 1027 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC093214.1-201ENST00000511688 1107 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 U82695.1-201ENST00000635752 1889 ntBASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC4Q5GLZ8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 AL355306.1-201ENST00000415580 579 ntBASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 AC022145.2-201ENST00000598203 171 ntBASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HERC4Q5GLZ8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AL592424.1-201ENST00000563624 1536 ntBASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms