Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1SQ13698 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 FLJ38576-201ENST00000623820 2459 ntBASIC19.66■□□□□ 0.74
CACNA1SQ13698 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1SQ13698 VDAC1P7-201ENST00000462417 847 ntBASIC19.66■□□□□ 0.74
CACNA1SQ13698 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 AGGF1P2-201ENST00000426656 2106 ntBASIC19.66■□□□□ 0.74
CACNA1SQ13698 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1SQ13698 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1SQ13698 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1SQ13698 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.66■□□□□ 0.74
CACNA1SQ13698 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 ACTG1P3-201ENST00000431775 1114 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC016694.1-201ENST00000434179 700 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 MIR3615-201ENST00000581999 87 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1SQ13698 MIR326-201ENST00000362220 95 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 BAATP1-201ENST00000412284 1225 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC074338.1-201ENST00000416825 156 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 GPAA1P2-201ENST00000417923 928 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC079316.1-201ENST00000548397 411 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC005695.3-201ENST00000614522 232 ntBASIC19.65■□□□□ 0.74
CACNA1SQ13698 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.65■□□□□ 0.74
CACNA1SQ13698 AC106886.4-201ENST00000623557 2502 ntBASIC19.64■□□□□ 0.74
CACNA1SQ13698 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1SQ13698 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.64■□□□□ 0.74
CACNA1SQ13698 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1SQ13698 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1SQ13698 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 RPL13P2-201ENST00000440687 659 ntBASIC19.64■□□□□ 0.73
CACNA1SQ13698 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 AC092171.3-201ENST00000610122 2651 ntBASIC19.64■□□□□ 0.73
CACNA1SQ13698 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1SQ13698 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CACNA1SQ13698 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1SQ13698 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1SQ13698 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1SQ13698 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1SQ13698 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1SQ13698 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1SQ13698 MTX1P1-201ENST00000440904 838 ntBASIC19.63■□□□□ 0.73
CACNA1SQ13698 FAM86HP-204ENST00000513466 959 ntBASIC19.63■□□□□ 0.73
CACNA1SQ13698 HNRNPUP1-201ENST00000554987 333 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms