Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PCDHB19P-201ENST00000570871 2371 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 AC008741.2-201ENST00000612792 3115 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 TREML5P-201ENST00000421694 576 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 FAM58DP-201ENST00000428076 619 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.41□□□□□ -0.1
NKX6-1P78426 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.41□□□□□ -0.1
NKX6-1P78426 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 AC243562.1-201ENST00000560672 389 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 AL135744.1-201ENST00000565098 629 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 AC140878.1-201ENST00000565277 250 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 RARRES2P8-201ENST00000566335 367 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 AC027307.3-201ENST00000594262 1100 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 FO538757.1-201ENST00000623083 1397 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 DOC2GP-204ENST00000639052 2548 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-1P78426 AKAP8P1-201ENST00000434743 1349 ntBASIC14.41□□□□□ -0.1
NKX6-1P78426 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX6-1P78426 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 SPDYE7P-202ENST00000420373 878 ntBASIC14.4□□□□□ -0.1
NKX6-1P78426 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 UGT1A2P-201ENST00000454886 866 ntBASIC14.4□□□□□ -0.1
NKX6-1P78426 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX6-1P78426 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX6-1P78426 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 AL161645.1-201ENST00000622716 1255 ntBASIC14.4□□□□□ -0.1
NKX6-1P78426 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.4□□□□□ -0.1
NKX6-1P78426 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms