Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
IRX3P78415 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
IRX3P78415 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX3P78415 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.94■□□□□ 0.62
IRX3P78415 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX3P78415 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
IRX3P78415 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
IRX3P78415 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX3P78415 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.94■□□□□ 0.62
IRX3P78415 AC093724.1-201ENST00000448659 1027 ntBASIC18.94■□□□□ 0.62
IRX3P78415 INE1-201ENST00000456273 945 ntBASIC18.94■□□□□ 0.62
IRX3P78415 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 AC044860.1-202ENST00000559481 777 ntBASIC18.94■□□□□ 0.62
IRX3P78415 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
IRX3P78415 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
IRX3P78415 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
IRX3P78415 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX3P78415 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
IRX3P78415 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 PCDH8P1-201ENST00000428983 2773 ntBASIC18.93■□□□□ 0.62
IRX3P78415 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
IRX3P78415 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.93■□□□□ 0.62
IRX3P78415 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
IRX3P78415 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
IRX3P78415 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX3P78415 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
IRX3P78415 AL118508.1-201ENST00000613502 2345 ntBASIC18.92■□□□□ 0.62
IRX3P78415 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
IRX3P78415 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
IRX3P78415 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 AC011495.1-201ENST00000498085 584 ntBASIC18.92■□□□□ 0.62
IRX3P78415 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX3P78415 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
IRX3P78415 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.92■□□□□ 0.62
IRX3P78415 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX3P78415 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX3P78415 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.92■□□□□ 0.62
IRX3P78415 AC008494.3-201ENST00000606615 944 ntBASIC18.92■□□□□ 0.62
IRX3P78415 AC020765.3-201ENST00000613051 740 ntBASIC18.92■□□□□ 0.62
IRX3P78415 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
IRX3P78415 IGHV3-72-202ENST00000621503 303 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms