Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL671883.3-201ENST00000603274 991 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AC008267.7-201ENST00000624570 1194 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AC068418.2-201ENST00000577309 3703 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 ACTG1P14-201ENST00000446382 1122 ntBASIC14.22□□□□□ -0.13
HIST1H3AP68431 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SPTSSB-204ENST00000617024 1292 ntBASIC14.22□□□□□ -0.13
HIST1H3AP68431 C20orf181-201ENST00000623918 480 ntBASIC14.22□□□□□ -0.13
HIST1H3AP68431 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H3AP68431 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H3AP68431 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 MIR346-201ENST00000362234 95 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 MIR940-201ENST00000401276 94 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms