Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC016027.1-202ENST00000607927 1699 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN20P56880 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 TFAMP1-201ENST00000412727 736 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AC254562.1-201ENST00000417586 456 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN20P56880 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.97□□□□□ -0.01
CLDN20P56880 KRT8P48-201ENST00000515599 1220 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN20P56880 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 SNHG9-202ENST00000564014 471 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AL135744.1-201ENST00000565098 629 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN20P56880 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 AC021097.1-201ENST00000607902 574 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 AC026120.1-201ENST00000611536 926 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AC105339.1-204ENST00000636249 355 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AL139011.1-202ENST00000642063 584 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 AL512652.2-201ENST00000625156 1716 ntBASIC14.97□□□□□ -0.01
CLDN20P56880 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN20P56880 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN20P56880 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN20P56880 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN20P56880 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CLDN20P56880 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN20P56880 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CLDN20P56880 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 WASH6P-202ENST00000359512 1437 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 CNN2P11-201ENST00000429351 262 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 SPDYE11-202ENST00000450699 704 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CLDN20P56880 FAM86C2P-203ENST00000528684 1004 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 SPDYE9P-201ENST00000570642 692 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN20P56880 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN20P56880 AC022145.2-201ENST00000598203 171 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.96□□□□□ -0.01
CLDN20P56880 SPDYE10P-202ENST00000612005 668 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN20P56880 SPDYE8P-202ENST00000612377 668 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.96□□□□□ -0.01
CLDN20P56880 AL513210.1-201ENST00000629608 234 ntBASIC14.96□□□□□ -0.01
CLDN20P56880 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN20P56880 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN20P56880 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN20P56880 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN20P56880 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.96□□□□□ -0.02
CLDN20P56880 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN20P56880 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN20P56880 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN20P56880 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CLDN20P56880 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CLDN20P56880 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms