Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH8P55286 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH8P55286 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH8P55286 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH8P55286 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH8P55286 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDH8P55286 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDH8P55286 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH8P55286 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH8P55286 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDH8P55286 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDH8P55286 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDH8P55286 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDH8P55286 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.32■□□□□ 0.36
CDH8P55286 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH8P55286 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 CNN2P2-201ENST00000443536 909 ntBASIC17.32■□□□□ 0.36
CDH8P55286 CNN2P3-201ENST00000450201 906 ntBASIC17.32■□□□□ 0.36
CDH8P55286 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH8P55286 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.32■□□□□ 0.36
CDH8P55286 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH8P55286 RFPL4AP1-201ENST00000530883 850 ntBASIC17.32■□□□□ 0.36
CDH8P55286 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.32■□□□□ 0.36
CDH8P55286 AC051619.7-201ENST00000568314 623 ntBASIC17.32■□□□□ 0.36
CDH8P55286 AC105021.1-202ENST00000570572 669 ntBASIC17.32■□□□□ 0.36
CDH8P55286 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 AC093512.1-201ENST00000617969 520 ntBASIC17.32■□□□□ 0.36
CDH8P55286 AL136317.3-201ENST00000618497 906 ntBASIC17.32■□□□□ 0.36
CDH8P55286 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH8P55286 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CDH8P55286 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDH8P55286 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH8P55286 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH8P55286 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH8P55286 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH8P55286 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH8P55286 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH8P55286 AL353705.2-201ENST00000428243 662 ntBASIC17.31■□□□□ 0.36
CDH8P55286 FAM86GP-201ENST00000448322 971 ntBASIC17.31■□□□□ 0.36
CDH8P55286 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH8P55286 AC015911.4-201ENST00000588022 1070 ntBASIC17.31■□□□□ 0.36
CDH8P55286 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH8P55286 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 AC007967.4-201ENST00000614700 386 ntBASIC17.31■□□□□ 0.36
CDH8P55286 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH8P55286 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH8P55286 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH8P55286 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDH8P55286 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH8P55286 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDH8P55286 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH8P55286 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms