Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.09■□□□□ 0.65
NEDD4P46934 TREML5P-201ENST00000421694 576 ntBASIC19.09■□□□□ 0.65
NEDD4P46934 AC107890.1-201ENST00000422478 521 ntBASIC19.09■□□□□ 0.65
NEDD4P46934 MTND6P24-201ENST00000440466 518 ntBASIC19.09■□□□□ 0.65
NEDD4P46934 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.09■□□□□ 0.65
NEDD4P46934 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.09■□□□□ 0.65
NEDD4P46934 RN7SL828P-201ENST00000607615 303 ntBASIC19.09■□□□□ 0.65
NEDD4P46934 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.09■□□□□ 0.65
NEDD4P46934 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.09■□□□□ 0.65
NEDD4P46934 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 AC024909.3-201ENST00000611513 2257 ntBASIC19.09■□□□□ 0.65
NEDD4P46934 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.09■□□□□ 0.65
NEDD4P46934 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
NEDD4P46934 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 CYP4F24P-201ENST00000586049 1580 ntBASIC19.08■□□□□ 0.65
NEDD4P46934 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 AC134407.2-201ENST00000625089 1978 ntBASIC19.08■□□□□ 0.65
NEDD4P46934 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.08■□□□□ 0.65
NEDD4P46934 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NEDD4P46934 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.08■□□□□ 0.65
NEDD4P46934 AC092580.3-201ENST00000430932 139 ntBASIC19.08■□□□□ 0.65
NEDD4P46934 AC067863.1-201ENST00000494933 530 ntBASIC19.08■□□□□ 0.65
NEDD4P46934 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.08■□□□□ 0.65
NEDD4P46934 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
NEDD4P46934 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEDD4P46934 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
NEDD4P46934 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NEDD4P46934 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.08■□□□□ 0.64
NEDD4P46934 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEDD4P46934 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.08■□□□□ 0.64
NEDD4P46934 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.08■□□□□ 0.64
NEDD4P46934 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NEDD4P46934 FO538757.1-201ENST00000623083 1397 ntBASIC19.08■□□□□ 0.64
NEDD4P46934 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEDD4P46934 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.08■□□□□ 0.64
NEDD4P46934 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEDD4P46934 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEDD4P46934 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.08■□□□□ 0.64
NEDD4P46934 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NEDD4P46934 AL162727.3-201ENST00000635661 2787 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 MIR648-201ENST00000385046 94 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 HAUS4P1-201ENST00000406739 1145 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 AL080243.2-201ENST00000418783 582 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.07■□□□□ 0.64
NEDD4P46934 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.07■□□□□ 0.64
NEDD4P46934 AC140878.1-201ENST00000565277 250 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.07■□□□□ 0.64
NEDD4P46934 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 AC005498.2-205ENST00000593218 784 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.07■□□□□ 0.64
NEDD4P46934 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
NEDD4P46934 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.07■□□□□ 0.64
NEDD4P46934 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NEDD4P46934 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
NEDD4P46934 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEDD4P46934 AL513523.2-202ENST00000427283 2040 ntBASIC19.07■□□□□ 0.64
NEDD4P46934 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NEDD4P46934 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEDD4P46934 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.06■□□□□ 0.64
NEDD4P46934 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.06■□□□□ 0.64
NEDD4P46934 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEDD4P46934 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEDD4P46934 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms