Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AL133499.1-201ENST00000596207 608 ntBASIC28.04■■■□□ 2.08
NCAPD3P42695 AP000346.4-201ENST00000614827 381 ntBASIC28.04■■■□□ 2.08
NCAPD3P42695 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 TUBBP5-203ENST00000508529 1334 ntBASIC28.04■■■□□ 2.08
NCAPD3P42695 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
NCAPD3P42695 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
NCAPD3P42695 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC28.03■■■□□ 2.08
NCAPD3P42695 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC28.03■■■□□ 2.08
NCAPD3P42695 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
NCAPD3P42695 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC28.03■■■□□ 2.08
NCAPD3P42695 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 PARVG-202ENST00000415224 999 ntTSL 2 BASIC28.03■■■□□ 2.08
NCAPD3P42695 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC28.03■■■□□ 2.08
NCAPD3P42695 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC28.03■■■□□ 2.08
NCAPD3P42695 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 CFL1-214ENST00000534769 758 ntTSL 2 BASIC28.03■■■□□ 2.08
NCAPD3P42695 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
NCAPD3P42695 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC28.03■■■□□ 2.08
NCAPD3P42695 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
NCAPD3P42695 AF254983.2-201ENST00000612331 135 ntBASIC28.03■■■□□ 2.08
NCAPD3P42695 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
NCAPD3P42695 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
NCAPD3P42695 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 TISP43-201ENST00000409793 538 ntTSL 4 BASIC28.02■■■□□ 2.08
NCAPD3P42695 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
NCAPD3P42695 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 DIO1-215ENST00000610607 796 ntTSL 5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC28.02■■■□□ 2.08
NCAPD3P42695 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 AL133267.1-201ENST00000398220 340 ntBASIC28.02■■■□□ 2.08
NCAPD3P42695 AC007274.2-201ENST00000421675 662 ntBASIC28.02■■■□□ 2.08
NCAPD3P42695 POU5F1P6-201ENST00000466990 990 ntBASIC28.02■■■□□ 2.08
NCAPD3P42695 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC28.02■■■□□ 2.08
NCAPD3P42695 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC28.02■■■□□ 2.08
NCAPD3P42695 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NCAPD3P42695 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
NCAPD3P42695 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC28.01■■■□□ 2.07
NCAPD3P42695 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC28.01■■■□□ 2.07
NCAPD3P42695 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC28.01■■■□□ 2.07
NCAPD3P42695 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC28.01■■■□□ 2.07
NCAPD3P42695 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC28.01■■■□□ 2.07
NCAPD3P42695 AC009053.2-201ENST00000563701 2365 ntBASIC28.01■■■□□ 2.07
NCAPD3P42695 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
NCAPD3P42695 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
NCAPD3P42695 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
NCAPD3P42695 UFM1-202ENST00000379649 846 ntTSL 4 BASIC28.01■■■□□ 2.07
NCAPD3P42695 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.07
NCAPD3P42695 AC104784.1-201ENST00000473096 294 ntBASIC28.01■■■□□ 2.07
NCAPD3P42695 AC024681.1-201ENST00000521917 487 ntBASIC28.01■■■□□ 2.07
NCAPD3P42695 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
NCAPD3P42695 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC28.01■■■□□ 2.07
NCAPD3P42695 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NCAPD3P42695 AC008132.1-202ENST00000342005 1389 ntBASIC28.01■■■□□ 2.07
NCAPD3P42695 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC28.01■■■□□ 2.07
NCAPD3P42695 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC28■■■□□ 2.07
NCAPD3P42695 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
NCAPD3P42695 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 SNX21-203ENST00000372541 771 ntTSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC28■■■□□ 2.07
NCAPD3P42695 MPV17-205ENST00000402310 906 ntTSL 5 BASIC28■■■□□ 2.07
NCAPD3P42695 AL133466.1-201ENST00000447582 150 ntBASIC28■■■□□ 2.07
NCAPD3P42695 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC28■■■□□ 2.07
NCAPD3P42695 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC28■■■□□ 2.07
NCAPD3P42695 AL450472.2-201ENST00000603663 1156 ntBASIC28■■■□□ 2.07
NCAPD3P42695 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC28■■■□□ 2.07
NCAPD3P42695 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms