Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TIMP2P16035 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP2P16035 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP2P16035 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP2P16035 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP2P16035 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.16■□□□□ 0.18
TIMP2P16035 AL512361.1-201ENST00000554200 418 ntBASIC16.16■□□□□ 0.18
TIMP2P16035 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP2P16035 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TIMP2P16035 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP2P16035 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 AC022144.1-201ENST00000602255 1580 ntBASIC16.16■□□□□ 0.18
TIMP2P16035 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TIMP2P16035 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP2P16035 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TIMP2P16035 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMP2P16035 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 AC004987.2-201ENST00000395959 1148 ntBASIC16.15■□□□□ 0.18
TIMP2P16035 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMP2P16035 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 RN7SL204P-201ENST00000582831 262 ntBASIC16.15■□□□□ 0.18
TIMP2P16035 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.15■□□□□ 0.18
TIMP2P16035 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TIMP2P16035 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMP2P16035 AL033527.5-202ENST00000641632 1098 ntBASIC16.15■□□□□ 0.18
TIMP2P16035 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP2P16035 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TIMP2P16035 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP2P16035 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TIMP2P16035 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMP2P16035 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.14■□□□□ 0.17
TIMP2P16035 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP2P16035 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms