Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL4P13236 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCL4P13236 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 AL691432.1-201ENST00000596308 1422 ntBASIC15.26■□□□□ 0.03
CCL4P13236 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL4P13236 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 AC104596.2-201ENST00000512793 793 ntBASIC15.25■□□□□ 0.03
CCL4P13236 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL4P13236 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.25■□□□□ 0.03
CCL4P13236 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL4P13236 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.25■□□□□ 0.03
CCL4P13236 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 MIR6799-201ENST00000620297 69 ntBASIC15.25■□□□□ 0.03
CCL4P13236 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL4P13236 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL4P13236 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL4P13236 OR6D1P-203ENST00000641209 4860 ntBASIC15.25■□□□□ 0.03
CCL4P13236 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CCL4P13236 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 AZGP1P1-201ENST00000411909 902 ntBASIC15.24■□□□□ 0.03
CCL4P13236 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL4P13236 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL4P13236 AC007389.4-201ENST00000454674 793 ntBASIC15.24■□□□□ 0.03
CCL4P13236 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCL4P13236 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 MIR4259-201ENST00000584466 101 ntBASIC15.24■□□□□ 0.03
CCL4P13236 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL4P13236 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 Z97205.2-201ENST00000564697 1639 ntBASIC15.24■□□□□ 0.03
CCL4P13236 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
CCL4P13236 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL4P13236 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL4P13236 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms