Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD28P10747 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.73□□□□□ -0.37
CD28P10747 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.73□□□□□ -0.37
CD28P10747 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 AL139011.1-202ENST00000642063 584 ntBASIC12.73□□□□□ -0.37
CD28P10747 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 MIR600HG-201ENST00000449175 5984 ntBASIC12.73□□□□□ -0.37
CD28P10747 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD28P10747 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC087499.5-201ENST00000452760 1342 ntBASIC12.72□□□□□ -0.37
CD28P10747 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.72□□□□□ -0.37
CD28P10747 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.72□□□□□ -0.37
CD28P10747 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.72□□□□□ -0.37
CD28P10747 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC093724.1-201ENST00000448659 1027 ntBASIC12.72□□□□□ -0.37
CD28P10747 AC009477.1-201ENST00000452936 217 ntBASIC12.72□□□□□ -0.37
CD28P10747 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.72□□□□□ -0.37
CD28P10747 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 AL079307.3-201ENST00000556114 283 ntBASIC12.72□□□□□ -0.37
CD28P10747 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC009407.1-201ENST00000568958 598 ntBASIC12.72□□□□□ -0.37
CD28P10747 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.72□□□□□ -0.37
CD28P10747 AC008738.7-201ENST00000609744 511 ntBASIC12.72□□□□□ -0.37
CD28P10747 AC020765.3-201ENST00000613051 740 ntBASIC12.72□□□□□ -0.37
CD28P10747 AL662799.1-202ENST00000614205 422 ntBASIC12.72□□□□□ -0.37
CD28P10747 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 AC124067.4-201ENST00000519691 2379 ntBASIC12.72□□□□□ -0.37
CD28P10747 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CD28P10747 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD28P10747 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.72□□□□□ -0.37
CD28P10747 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD28P10747 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms