Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AC140658.5-201ENST00000438532 169 ntBASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HNRNPCL4P0DMR1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 AL365330.1-201ENST00000607459 531 ntBASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
HNRNPCL4P0DMR1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms