Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 AL592424.1-201ENST00000563624 1536 ntBASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRGAP2CP0DJJ0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 MIR661-201ENST00000384842 89 ntBASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 RN7SL204P-201ENST00000582831 262 ntBASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRGAP2CP0DJJ0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 MRPS18AP1-201ENST00000414458 589 ntBASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AL139010.1-201ENST00000454878 894 ntBASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AC138761.1-201ENST00000584393 385 ntBASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SRGAP2CP0DJJ0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 AL662844.4-201ENST00000606367 2838 ntBASIC17.83■□□□□ 0.45
SRGAP2CP0DJJ0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRGAP2CP0DJJ0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRGAP2CP0DJJ0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.83■□□□□ 0.44
SRGAP2CP0DJJ0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRGAP2CP0DJJ0 AL080243.2-201ENST00000418783 582 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms