Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 CYP4F24P-201ENST00000586049 1580 ntBASIC15.83■□□□□ 0.12
TNFP01375 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 AL136982.4-201ENST00000437689 1740 ntBASIC15.82■□□□□ 0.12
TNFP01375 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFP01375 AC005034.1-201ENST00000426657 489 ntBASIC15.82■□□□□ 0.12
TNFP01375 AL353779.1-201ENST00000434793 351 ntBASIC15.82■□□□□ 0.12
TNFP01375 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFP01375 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFP01375 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.82■□□□□ 0.12
TNFP01375 AL132655.2-201ENST00000596276 594 ntBASIC15.82■□□□□ 0.12
TNFP01375 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFP01375 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFP01375 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TNFP01375 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFP01375 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFP01375 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TNFP01375 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.81■□□□□ 0.12
TNFP01375 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 AC114501.2-201ENST00000439631 535 ntBASIC15.81■□□□□ 0.12
TNFP01375 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 AC245100.5-201ENST00000452108 331 ntBASIC15.81■□□□□ 0.12
TNFP01375 DOC2GP-202ENST00000514950 1163 ntBASIC15.81■□□□□ 0.12
TNFP01375 AP005018.1-201ENST00000525475 301 ntBASIC15.81■□□□□ 0.12
TNFP01375 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 AC104794.3-201ENST00000566840 1248 ntBASIC15.81■□□□□ 0.12
TNFP01375 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.81■□□□□ 0.12
TNFP01375 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 AC012645.4-201ENST00000610691 1061 ntBASIC15.81■□□□□ 0.12
TNFP01375 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFP01375 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TNFP01375 AL035252.4-201ENST00000624174 288 ntBASIC15.81■□□□□ 0.12
TNFP01375 AC080080.1-201ENST00000625121 2420 ntBASIC15.81■□□□□ 0.12
TNFP01375 AC025048.6-201ENST00000634326 1161 ntBASIC15.81■□□□□ 0.12
TNFP01375 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFP01375 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFP01375 AC022211.2-201ENST00000585075 2527 ntBASIC15.81■□□□□ 0.12
TNFP01375 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms