Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
GGPS1O95749 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
GGPS1O95749 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.2■□□□□ 0.5
GGPS1O95749 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 GAPDHP21-201ENST00000450301 1010 ntBASIC18.2■□□□□ 0.5
GGPS1O95749 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.2■□□□□ 0.5
GGPS1O95749 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.2■□□□□ 0.5
GGPS1O95749 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.2■□□□□ 0.5
GGPS1O95749 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.2■□□□□ 0.5
GGPS1O95749 OR6D1P-203ENST00000641209 4860 ntBASIC18.2■□□□□ 0.5
GGPS1O95749 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 PCDHA14-201ENST00000506751 2298 ntBASIC18.2■□□□□ 0.5
GGPS1O95749 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GGPS1O95749 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.2■□□□□ 0.5
GGPS1O95749 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.2■□□□□ 0.5
GGPS1O95749 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.19■□□□□ 0.5
GGPS1O95749 RN7SL692P-201ENST00000464677 288 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 SPDYE18-201ENST00000510091 1050 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 AL596325.1-201ENST00000563991 1082 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.19■□□□□ 0.5
GGPS1O95749 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.19■□□□□ 0.5
GGPS1O95749 AC004790.1-201ENST00000612686 536 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 AL358472.5-202ENST00000641448 1267 ntBASIC18.19■□□□□ 0.5
GGPS1O95749 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GGPS1O95749 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GGPS1O95749 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.19■□□□□ 0.5
GGPS1O95749 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.19■□□□□ 0.5
GGPS1O95749 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.18■□□□□ 0.5
GGPS1O95749 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 AL136982.4-201ENST00000437689 1740 ntBASIC18.18■□□□□ 0.5
GGPS1O95749 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GGPS1O95749 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GGPS1O95749 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.18■□□□□ 0.5
GGPS1O95749 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 POU5F1P6-201ENST00000466990 990 ntBASIC18.18■□□□□ 0.5
GGPS1O95749 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.18■□□□□ 0.5
GGPS1O95749 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.18■□□□□ 0.5
GGPS1O95749 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms