Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 AC097493.3-201ENST00000509725 367 ntBASIC16.45■□□□□ 0.22
KDELR3O43731 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 AC243562.2-201ENST00000561247 970 ntBASIC16.45■□□□□ 0.22
KDELR3O43731 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.45■□□□□ 0.22
KDELR3O43731 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 AL589739.1-201ENST00000607720 493 ntBASIC16.45■□□□□ 0.22
KDELR3O43731 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KDELR3O43731 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 FO538757.1-201ENST00000623083 1397 ntBASIC16.45■□□□□ 0.22
KDELR3O43731 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.45■□□□□ 0.22
KDELR3O43731 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 CETN4P-206ENST00000642099 2168 ntBASIC16.45■□□□□ 0.22
KDELR3O43731 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KDELR3O43731 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
KDELR3O43731 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDELR3O43731 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
KDELR3O43731 CYP4F24P-201ENST00000586049 1580 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 SPDYE17-201ENST00000412399 783 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 AC055876.3-201ENST00000431496 288 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 HLA-V-204ENST00000476601 1289 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 AL079307.3-201ENST00000556114 283 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.44■□□□□ 0.22
KDELR3O43731 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 AC138649.4-201ENST00000612222 287 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 AC073592.8-201ENST00000624126 511 ntBASIC16.44■□□□□ 0.22
KDELR3O43731 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.44■□□□□ 0.22
KDELR3O43731 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.44■□□□□ 0.22
KDELR3O43731 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDELR3O43731 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 AP001282.1-201ENST00000531301 1499 ntBASIC16.43■□□□□ 0.22
KDELR3O43731 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
KDELR3O43731 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KDELR3O43731 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.43■□□□□ 0.22
KDELR3O43731 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.43■□□□□ 0.22
KDELR3O43731 AC092580.3-201ENST00000430932 139 ntBASIC16.43■□□□□ 0.22
KDELR3O43731 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
KDELR3O43731 AC027369.6-201ENST00000525520 931 ntBASIC16.43■□□□□ 0.22
KDELR3O43731 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KDELR3O43731 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.43■□□□□ 0.22
KDELR3O43731 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.43■□□□□ 0.22
KDELR3O43731 AL138828.2-201ENST00000615812 383 ntBASIC16.43■□□□□ 0.22
KDELR3O43731 SPDYE12P-201ENST00000618416 771 ntBASIC16.43■□□□□ 0.22
KDELR3O43731 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.43■□□□□ 0.22
KDELR3O43731 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
KDELR3O43731 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.43■□□□□ 0.22
KDELR3O43731 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KDELR3O43731 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms