Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXA2O43364 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXA2O43364 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXA2O43364 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 RN7SL399P-201ENST00000471648 279 ntBASIC17.27■□□□□ 0.36
HOXA2O43364 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXA2O43364 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXA2O43364 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HOXA2O43364 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HOXA2O43364 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA2O43364 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.27■□□□□ 0.35
HOXA2O43364 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA2O43364 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXA2O43364 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXA2O43364 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA2O43364 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA2O43364 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA2O43364 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HOXA2O43364 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.27■□□□□ 0.35
HOXA2O43364 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXA2O43364 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA2O43364 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA2O43364 MIR658-201ENST00000385210 100 ntBASIC17.26■□□□□ 0.35
HOXA2O43364 BOLA2P3-201ENST00000404566 256 ntBASIC17.26■□□□□ 0.35
HOXA2O43364 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA2O43364 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA2O43364 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA2O43364 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA2O43364 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA2O43364 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA2O43364 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA2O43364 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXA2O43364 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HOXA2O43364 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXA2O43364 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 AZGP1P1-201ENST00000411909 902 ntBASIC17.25■□□□□ 0.35
HOXA2O43364 AL442647.2-201ENST00000429864 857 ntBASIC17.25■□□□□ 0.35
HOXA2O43364 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 RPS2P32-201ENST00000439199 892 ntBASIC17.25■□□□□ 0.35
HOXA2O43364 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXA2O43364 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXA2O43364 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HOXA2O43364 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXA2O43364 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXA2O43364 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 AC078925.2-201ENST00000624013 1973 ntBASIC17.25■□□□□ 0.35
HOXA2O43364 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA2O43364 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
HOXA2O43364 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HOXA2O43364 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms