Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RIPK2O43353 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 HAUS4P1-201ENST00000406739 1145 ntBASIC16.57■□□□□ 0.24
RIPK2O43353 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.57■□□□□ 0.24
RIPK2O43353 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.57■□□□□ 0.24
RIPK2O43353 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.57■□□□□ 0.24
RIPK2O43353 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.57■□□□□ 0.24
RIPK2O43353 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RIPK2O43353 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.56■□□□□ 0.24
RIPK2O43353 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RIPK2O43353 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.56■□□□□ 0.24
RIPK2O43353 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.56■□□□□ 0.24
RIPK2O43353 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.56■□□□□ 0.24
RIPK2O43353 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.56■□□□□ 0.24
RIPK2O43353 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 AL732292.2-201ENST00000609649 430 ntBASIC16.56■□□□□ 0.24
RIPK2O43353 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RIPK2O43353 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.56■□□□□ 0.24
RIPK2O43353 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RIPK2O43353 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RIPK2O43353 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.56■□□□□ 0.24
RIPK2O43353 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.55■□□□□ 0.24
RIPK2O43353 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RIPK2O43353 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 AC090616.6-203ENST00000579186 1945 ntBASIC16.55■□□□□ 0.24
RIPK2O43353 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RIPK2O43353 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.55■□□□□ 0.24
RIPK2O43353 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.55■□□□□ 0.24
RIPK2O43353 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.55■□□□□ 0.24
RIPK2O43353 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.55■□□□□ 0.24
RIPK2O43353 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.55■□□□□ 0.24
RIPK2O43353 AC092119.3-201ENST00000612618 583 ntBASIC16.55■□□□□ 0.24
RIPK2O43353 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RIPK2O43353 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.55■□□□□ 0.24
RIPK2O43353 AL355877.3-201ENST00000622820 899 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms