Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCC4O15439 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.58■□□□□ 0.88
ABCC4O15439 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.58■□□□□ 0.88
ABCC4O15439 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.57■□□□□ 0.88
ABCC4O15439 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 AC009477.1-201ENST00000452936 217 ntBASIC20.57■□□□□ 0.88
ABCC4O15439 MEIS3P1-201ENST00000495167 958 ntBASIC20.57■□□□□ 0.88
ABCC4O15439 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.57■□□□□ 0.88
ABCC4O15439 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ABCC4O15439 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
ABCC4O15439 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ABCC4O15439 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ABCC4O15439 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.57■□□□□ 0.88
ABCC4O15439 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCC4O15439 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ABCC4O15439 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCC4O15439 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ABCC4O15439 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ABCC4O15439 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 RNA5SP410-201ENST00000516285 106 ntBASIC20.56■□□□□ 0.88
ABCC4O15439 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.56■□□□□ 0.88
ABCC4O15439 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 BANF1P1-201ENST00000553684 263 ntBASIC20.56■□□□□ 0.88
ABCC4O15439 AL596325.1-201ENST00000563991 1082 ntBASIC20.56■□□□□ 0.88
ABCC4O15439 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ABCC4O15439 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
ABCC4O15439 AL365203.3-201ENST00000609742 2057 ntBASIC20.56■□□□□ 0.88
ABCC4O15439 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCC4O15439 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ABCC4O15439 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCC4O15439 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ABCC4O15439 COX5BP8-201ENST00000416911 349 ntBASIC20.55■□□□□ 0.88
ABCC4O15439 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 LINC02447-202ENST00000501888 2146 ntBASIC20.55■□□□□ 0.88
ABCC4O15439 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.55■□□□□ 0.88
ABCC4O15439 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.55■□□□□ 0.88
ABCC4O15439 AC024267.1-201ENST00000582320 895 ntBASIC20.55■□□□□ 0.88
ABCC4O15439 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ABCC4O15439 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ABCC4O15439 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 AC112504.1-201ENST00000623415 1841 ntBASIC20.55■□□□□ 0.88
ABCC4O15439 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ABCC4O15439 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCC4O15439 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCC4O15439 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms