Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL671883.3-201ENST00000603274 991 ntBASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB4C9JG80 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.36□□□□□ -0.11
NPIPB4C9JG80 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 MIR940-201ENST00000401276 94 ntBASIC14.36□□□□□ -0.11
NPIPB4C9JG80 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 RNA5SP410-201ENST00000516285 106 ntBASIC14.36□□□□□ -0.11
NPIPB4C9JG80 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 AC026979.3-201ENST00000607315 403 ntBASIC14.36□□□□□ -0.11
NPIPB4C9JG80 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB4C9JG80 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 TIMM8BP1-201ENST00000452384 211 ntBASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AL139010.1-201ENST00000454878 894 ntBASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AC005829.1-201ENST00000570002 483 ntBASIC14.35□□□□□ -0.11
NPIPB4C9JG80 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms