Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 GK-202ENST00000378941 458 ntTSL 3 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AZGP1P1-201ENST00000411909 902 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 MEIS3P1-201ENST00000495167 958 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 WASH4P-201ENST00000564273 1246 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC093726.1-201ENST00000608064 963 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 AC009053.2-201ENST00000563701 2365 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 BNIP3P1-202ENST00000550043 1585 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC005052.1-201ENST00000625181 2492 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 HAUS4P1-201ENST00000406739 1145 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC011495.1-201ENST00000498085 584 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms