Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 AC241585.1-201ENST00000433527 519 ntBASIC18.72■□□□□ 0.59
PALM3A6NDB9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 AC093214.1-201ENST00000511688 1107 ntBASIC18.72■□□□□ 0.59
PALM3A6NDB9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 SPCS2P1-201ENST00000561636 679 ntBASIC18.72■□□□□ 0.59
PALM3A6NDB9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 CYP2T1P-202ENST00000641596 2535 ntBASIC18.72■□□□□ 0.59
PALM3A6NDB9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PALM3A6NDB9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PALM3A6NDB9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 AC004987.2-201ENST00000395959 1148 ntBASIC18.71■□□□□ 0.59
PALM3A6NDB9 HAUS4P1-201ENST00000406739 1145 ntBASIC18.71■□□□□ 0.59
PALM3A6NDB9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 AC004890.2-204ENST00000481968 304 ntBASIC18.71■□□□□ 0.59
PALM3A6NDB9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 IGHV3-42-201ENST00000520410 361 ntBASIC18.71■□□□□ 0.59
PALM3A6NDB9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PALM3A6NDB9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.71■□□□□ 0.59
PALM3A6NDB9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.7■□□□□ 0.58
PALM3A6NDB9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 MIR648-201ENST00000385046 94 ntBASIC18.7■□□□□ 0.58
PALM3A6NDB9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 BASP1P1-201ENST00000430708 665 ntBASIC18.7■□□□□ 0.58
PALM3A6NDB9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 EEF1DP4-201ENST00000446006 880 ntBASIC18.7■□□□□ 0.58
PALM3A6NDB9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 AL096865.1-201ENST00000606796 927 ntBASIC18.7■□□□□ 0.58
PALM3A6NDB9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PALM3A6NDB9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.7■□□□□ 0.58
PALM3A6NDB9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms