Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 AC140658.5-201ENST00000438532 169 ntBASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 AC074386.1-202ENST00000463561 864 ntBASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 FER1L4-210ENST00000615531 5998 ntBASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC4Q9Y296 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AC109635.5-201ENST00000533593 962 ntBASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AL031055.1-201ENST00000606362 631 ntBASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC4Q9Y296 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 449.1 ms