Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC044860.1-202ENST00000559481 777 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 MIR6069-201ENST00000620069 79 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 AC092364.2-201ENST00000596710 2692 ntBASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AL136982.4-201ENST00000437689 1740 ntBASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 SPDYE22P-201ENST00000582158 798 ntBASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DENND2AQ9ULE3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 CYP4F24P-201ENST00000586049 1580 ntBASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 AC245100.5-201ENST00000452108 331 ntBASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 AL662799.1-202ENST00000614205 422 ntBASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.61■□□□□ 0.73
DENND2AQ9ULE3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.6■□□□□ 0.73
DENND2AQ9ULE3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms