Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 AC069335.1-201ENST00000489972 472 ntBASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 LINC01225-203ENST00000563550 1244 ntBASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 AC008267.7-201ENST00000624570 1194 ntBASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CUEDC1Q9NWM3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 FOXO1B-201ENST00000504678 1527 ntBASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC063926.2-201ENST00000623766 1308 ntBASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC138761.1-201ENST00000584393 385 ntBASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC027612.4-201ENST00000605371 583 ntBASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC093028.1-201ENST00000622998 982 ntBASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CUEDC1Q9NWM3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 IGHV3-62-201ENST00000520057 340 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms