Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 AL136982.4-201ENST00000437689 1740 ntBASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 AL691432.1-201ENST00000596308 1422 ntBASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BLOC1S4Q9NUP1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 CNN2P11-201ENST00000429351 262 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 DNAJB3-202ENST00000449667 1266 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AC023141.5-201ENST00000458585 616 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 BANF1P1-201ENST00000553684 263 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AC132872.4-202ENST00000622924 2756 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 AP005117.1-202ENST00000581724 1908 ntBASIC18.04■□□□□ 0.48
BLOC1S4Q9NUP1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 PAUPAR-201ENST00000630360 2965 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RPS8P6-201ENST00000426177 609 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RBPMS2P1-201ENST00000437762 623 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 AC026150.2-201ENST00000564693 1156 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 AL596442.2-201ENST00000610240 980 ntBASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms