Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH9Q9HC56 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 PMS2P4-201ENST00000412466 1052 ntBASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC002347.1-201ENST00000569543 541 ntBASIC16.84■□□□□ 0.29
PCDH9Q9HC56 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC068137.2-201ENST00000605408 478 ntBASIC16.84■□□□□ 0.29
PCDH9Q9HC56 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH9Q9HC56 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDH9Q9HC56 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH9Q9HC56 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
PCDH9Q9HC56 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH9Q9HC56 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH9Q9HC56 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 AC140658.5-201ENST00000438532 169 ntBASIC16.83■□□□□ 0.28
PCDH9Q9HC56 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 AC126177.1-201ENST00000547829 2218 ntBASIC16.83■□□□□ 0.28
PCDH9Q9HC56 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH9Q9HC56 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms