Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 AC138969.2-201ENST00000532739 9932 ntBASIC14.31□□□□□ -0.12
ELL3Q9HB65 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.31□□□□□ -0.12
ELL3Q9HB65 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ELL3Q9HB65 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 GGT3P-204ENST00000453783 1664 ntBASIC14.3□□□□□ -0.12
ELL3Q9HB65 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AC012640.2-201ENST00000561606 901 ntBASIC14.3□□□□□ -0.12
ELL3Q9HB65 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 MIR7706-201ENST00000613747 67 ntBASIC14.3□□□□□ -0.12
ELL3Q9HB65 AC107918.4-202ENST00000641623 219 ntBASIC14.3□□□□□ -0.12
ELL3Q9HB65 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 AC006504.4-201ENST00000592118 1568 ntBASIC14.3□□□□□ -0.12
ELL3Q9HB65 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.3□□□□□ -0.12
ELL3Q9HB65 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ELL3Q9HB65 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ELL3Q9HB65 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.29□□□□□ -0.12
ELL3Q9HB65 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms