Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 TSEN15P1-201ENST00000423257 515 ntBASIC17.15■□□□□ 0.34
LHX5Q9H2C1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 FAM58DP-201ENST00000428076 619 ntBASIC17.15■□□□□ 0.34
LHX5Q9H2C1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.15■□□□□ 0.34
LHX5Q9H2C1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.15■□□□□ 0.34
LHX5Q9H2C1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LHX5Q9H2C1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.14■□□□□ 0.34
LHX5Q9H2C1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
LHX5Q9H2C1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 AP001282.1-201ENST00000531301 1499 ntBASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 RARRES2P9-201ENST00000565168 469 ntBASIC17.14■□□□□ 0.33
LHX5Q9H2C1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LHX5Q9H2C1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 KRT18P32-201ENST00000424695 1287 ntBASIC17.13■□□□□ 0.33
LHX5Q9H2C1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 AC010491.1-201ENST00000563101 2797 ntBASIC17.13■□□□□ 0.33
LHX5Q9H2C1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.13■□□□□ 0.33
LHX5Q9H2C1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LHX5Q9H2C1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms